An Overview
Research
Publications

Email: dboffelli@chori.org

CHORI Staff Directory
CHORI Intranet
CHORI News

 

Selected Publications

  1. QF Wang, S Prabhakar, S Chanan, JF Cheng, EM Rubin and Boffelli D, "Detection of weakly conserved ancestral mammalian regulatory sequences by primate comparisons", Genome Biology (2007), 8:R1.

  2. Woyke T, Teeling H, Ivanova NN, Richter M, Hunteman M, Mussmann M, Boffelli D, Barry KW, Shapiro HJ, Anderson IJ, Gloeckner FO, Bergin C, Ruehland C, Amann R, Kyrpides NC, Markowitz VM, Rubin EM and Dubilier N, "Metagenomic analysis of microbial symbionts in a gutless worm", Nature, (2006), 443:950.

  3. Wang QF, Prabhakar S, Wang Q, Chanan S, Brown M, Cheng JF, Rubin EM and Boffelli D, "Evolution of a Primate Specific Cholesterol Sensing Enhancer", Genome Biology, (2006), 7:R68.

  4. Boffelli D, Weer CV, Weng L, Lewis KD, Shoukry MI, Pachter L, Keys DN and Rubin EM, "Intra-species sequence comparisons for annotating genomes", Genome Research, (2004), 14:2406-11.

  5. Boffelli D, Nobrega MA and Rubin EM, "Comparative genomics at the vertebrate extremes", Nature Review Genetics, (2004); 5:456-465.

  6. Boffelli D, Cheng JF and Rubin EM; "Convergent evolution in primates and an insectivore"; Genomics (2004); 83:19-23.

  7. Boffelli D, McAuliffe J, Ovcharenko D, Lewis KD, Pachter L and Rubin EM; "Phylogenetic shadowing of primate sequences to find functional regions of the human genome"; Science (2003); 299:1391-4.

  8. Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and Hayashizaki Y; "Functional annotation of a full-length mouse cDNA collection"; Nature (2001); 409:685-90.

 

© 2005 Children's Hospital Oakland Research Institute
5700 Martin Luther King Jr Way • Oakland, California 94609
Phone 510-450-7600 • Fax 510-450-7910
Site Map • Disclaimer • CHORI Intranet • Email Webmaster